Quick comparison # App Pricing Verified price Open source Platforms Verified facts Score 1 GephiOpen source — Yes Windows, macOS, Linux +1 5 of 5 68.8 2 CytoscapeOpen source — Yes Windows, macOS, Linux +1 4 of 4 64.8 3 KumuFree plan + paid $9/month per private project No Web, Self-hosted 4 of 4 61.8 4 Neo4jOpen source — Yes Windows, macOS, Linux +2 5 of 5 51.2
1 1. Gephi Top pick Best for: Researchers, journalists and analysts who need to map and measure large networks for free
Open source Windows, macOS, Linux, Web
Why switch from Linkurious
Free open-source desktop app for network analysis and visualization, without needing a graph database.
Pros Handles very large graphs with fast layout algorithms Built-in community detection and centrality metrics Exports publication-ready PNG, PDF and SVG Free and open source, with a browser-based Gephi LiteCons Steep learning curve for newcomers Java desktop app that can feel dated and unstable No real-time collaborationHow this score is calculated Editorial fit ×0.3 100
Reviews ×0.3 63
Clicks (90 days) ×0.15 0
Freshness ×0.15 100
Votes ×0.1 50
0 counted reviews, 0 up and 0 down votes. Full formula
2 Best for: Biologists and data scientists analyzing interaction networks alongside their own data
Open source Windows, macOS, Linux, Web
Why switch from Linkurious
Free open-source network analysis tool with a large plugin ecosystem, popular in research.
Pros Large app ecosystem for clustering, statistics and domain-specific tools Scriptable from R and Python Free and open source under the LGPL Strong support for biological data formats and pathway databasesCons Interface and terminology are geared to biology Many analysis features depend on installing separate apps Java desktop app that can be heavy on large networksHow this score is calculated Editorial fit ×0.3 87
Reviews ×0.3 63
Clicks (90 days) ×0.15 0
Freshness ×0.15 100
Votes ×0.1 50
0 counted reviews, 0 up and 0 down votes. Full formula
3 Best for: Nonprofits, consultants and educators mapping stakeholders or systems for others to explore
Free plan + paid Self-hostable Web, Self-hosted
Why switch from Linkurious
Affordable browser-based relationship mapping for smaller teams and stakeholder maps.
Pros Runs in the browser with nothing to install Unlimited public projects and collaborators for free Presentation builder and embeddable maps Self-hosted Enterprise option for sensitive dataCons Private projects are billed per project, which adds up Fewer analysis algorithms than Gephi or Cytoscape Free projects are public and indexed by search enginesHow this score is calculated Editorial fit ×0.3 77
Reviews ×0.3 63
Clicks (90 days) ×0.15 0
Freshness ×0.15 100
Votes ×0.1 50
0 counted reviews, 0 up and 0 down votes. Full formula
4 Best for: Developers modelling highly connected data such as fraud, recommendations or knowledge graphs
Open source Self-hostable Windows, macOS, Linux, Web, Self-hosted
Why switch from Linkurious
Teams already on Neo4j can use its own visual graph exploration tools instead of a separate investigation layer.
Pros Cypher makes graph queries short and readable Free Desktop app with import, query and visual tools Managed AuraDB cloud with a free tier Large community, courses and integrationsCons Clustering and advanced security need the paid Enterprise Edition Desktop's bundled Enterprise licence is for local single-user use only Memory-hungry on large graphsHow this score is calculated Editorial fit ×0.3 41
Reviews ×0.3 63
Clicks (90 days) ×0.15 0
Freshness ×0.15 100
Votes ×0.1 50
0 counted reviews, 0 up and 0 down votes. Full formula